PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0113s0026.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 262aa    MW: 28352.3 Da    PI: 4.4878
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0113s0026.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76e-183383155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa  +l+g
  Kalax.0113s0026.1.p 33 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALICLKG 83
                         59*****998.**********9...336***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.11E-183394No hitNo description
Gene3DG3DSA:3.30.730.101.1E-283493IPR001471AP2/ERF domain
SuperFamilySSF541712.75E-183494IPR016177DNA-binding domain
SMARTSM003801.6E-333498IPR001471AP2/ERF domain
PfamPF008474.8E-113483IPR001471AP2/ERF domain
PROSITE profilePS5103221.7463492IPR001471AP2/ERF domain
PRINTSPR003676.6E-93546IPR001471AP2/ERF domain
PRINTSPR003676.6E-95773IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MVKTVVKVEA ADRTTKRTMS SSASSSTTSA AGKKYKGVRM RSWGSWVSEI RAPNQKTRIW  60
LGSYSTAEAA ARAYDAALIC LKGSSATNLN FPLSSPHYLI PDTSTLMSPK SIQRVAAAAA  120
ANSYYVPDTT PATTNVSFFS PSSSSPLSSP SMSSDQFDDE SADVPLVAPS HDDQPLDTDY  180
GFRTNGVMST AAPCWFDHHF NTTNFDGSCF ESPKCADLQM FNTAADADAD AASLFNPPAF  240
MDYEQDYFYE EEVDIPLWSF C*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-143093164ATERF1
3gcc_A2e-143093164ATERF1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-30ERF family protein